Cell Segmentation Benchmark – Cell Tracking Challenge

The following table presents the best three results for every dataset in terms of OP_CSB, SEG, and DET measures, respectively. Refer to Evaluation Methodology for an explanation of these measures and to Participants for a detailed description of individual algorithms.

Inter-annotator variability

The inter-annotator variability is expressed in the form of mean ± standard deviation of the SEG and DET scores for the three manual annotations used to create the gold reference annotations. The NA records correspond to the situations when only one manual tracking annotation exists (Fluo-N3DH-CE, Fluo-N3DL-DRO, Fluo-N3DL-TRIC, and Fluo-N3DL-TRIF) or when no manual annotation was necessary to create due to the existence of absolute ground truth annotations for the simulated datasets (Fluo-C3DH-A549-SIM, Fluo-N2DH-SIM+, and Fluo-N3DH-SIM+).

2023-02-27: New submissions AC (6) and HD-GE (BMCV) (4) included.
2022-05-11: New submission UFRGS-BR included.
2022-06-01: The submission AC (5) renamed to BGU-IL (5). The generalizable submissions transferred.
2022-03-14: New submissions KIT-Loe-GE, MPI-Br-GE (2), and MSU-RU included. The submission MPI-Br-GE renamed to MPI-Br-GE (1).
2021-12-22: New submissions BFR-GE (1), BFR-GE (2), JAN-US, ND-US (2), and HD-Wag-GE included. The submission DESU-US updated. The submission ND-US renamed to ND-US (1).
2021-10-22: New submission MON-AU included. The submissions BGU-IL (5) and KIT-Sch-GE (2) updated.
2021-08-13: The submission AC (4) renamed to UNSW-AU. The submission DREX-US updated.
2021-07-19: New submission MPI-Ar-GE included. The submission MPI-GE renamed to MPI-Br-GE.
2021-05-09: The submissions AC (4) and KIT-Sch-GE (2) updated.
2021-04-28: New submission IGFL-FR included.
2021-04-13: All ISBI 2021 secondary track submissions included.
2021-01-15: New submissions AC (4), CSU-CN, HDU-CN, and MU-Wa-US included. The submission PURD-US updated.
2020-11-15: New submission UCH-CL included.
2020-08-01: New submission WARW-UK included.
2020-07-28: New submission DKFZ-GE included. The submission CALT-US updated.
2020-06-05: The submission CALT-US updated. The submission RWTH-GE split into RWTH-GE (1), RWTH-GE (2), and RWTH-GE (3).
2020-04-03: All ISBI 2020 submissions included.
2020-02-12: The submission UVA-NL updated.
2020-01-27: New submission PURD-US included.
2020-01-14: New submission BGU-IL (5) included.
2019-12-19: New submissions OX-UK and UVA-NL included. The submission MU-Lux-CZ updated.
2019-11-30: The scores for Fluo-N3DH-CE and Fluo-N3DL-DRO updated.
2019-10-14: The submission MU-Akb-CZ updated.
2019-09-02: The submission MU-Lux-CZ updated.
2019-07-15: The submission MU-Lux-CZ updated.
2019-04-30: The submission HIT-CN updated.
2019-04-08: All ISBI 2019 submissions included. The segmentation benchmark opened for online submissions.
2018-10-15: The segmentation benchmark initiated.

*The previous leaderboards can be accessed via clicking on the date of individual records.